UPF3 regulator of nonsense transcripts homolog A (yeast)

Symbol

UPF3A (may also be known as: None)

Organism

Human

Description

This gene encodes a protein that is part of a post-splicing multiprotein complex involved in both mRNA nuclear export and mRNA surveillance. The encoded protein is one of two functional homologs to yeast Upf3p. mRNA surveillance detects exported mRNAs with truncated open reading frames and initiates nonsense-mediated mRNA decay (NMD). When translation ends upstream from the last exon-exon junction, this triggers NMD to degrade mRNAs containing premature stop codons. This protein binds to the mRNA and remains bound after nuclear export, acting as a nucleocytoplasmic shuttling protein. It forms with Y14 a complex that binds specifically 20 nt upstream of exon-exon junctions. This gene is located on the long arm of chromosome 13. Two splice variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

Orthologs

SymbolSpecies
smg-4 Caenorhabditis elegans
Upf3 Drosophila melanogaster
upf3a Danio rerio
Upf3a Mus musculus
Upf3a Rattus norvegicus
upf3 Schizosaccharomyces pombe

Links to external resources

Changes associated with this gene

GO Terms

GO IDGO TermGO Category
GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay biological_process
GO:0006810 transport biological_process
GO:0006913 nucleocytoplasmic transport biological_process
GO:0010467 gene expression biological_process
GO:0016070 RNA metabolic process biological_process
GO:0016071 mRNA metabolic process biological_process
GO:0045727 positive regulation of translation biological_process
GO:0051028 mRNA transport biological_process
GO:0005634 nucleus cellular_component
GO:0005730 nucleolus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005829 cytosol cellular_component
GO:0005886 plasma membrane cellular_component
GO:0035145 exon-exon junction complex cellular_component
GO:0000166 nucleotide binding molecular_function
GO:0003723 RNA binding molecular_function
GO:0005487 nucleocytoplasmic transporter activity molecular_function
GO:0005515 protein binding molecular_function