serine palmitoyltransferase, long chain base subunit 3

Symbol

SPTLC3 (may also be known as: None)

Organism

Human

Description

The SPTLC3 gene encodes an isoform of the third subunit of serine palmitoyltransferase (SPT; EC 2.3.1.50), which catalyzes the rate-limiting step of the de novo synthesis of sphingolipids (Hornemann et al., 2006 [PubMed 17023427]). SPT contains 2 main subunits: the common SPTLC1 subunit (MIM 605712) and either SPTLC2 (MIM 605713) or its isoform SPTLC2L (SPTLC3), depending on the tissue in which biosynthesis occurs (Hornemann et al., 2006 [PubMed 17023427]). There are also 2 highly related isoforms of a third subunit, SSSPTA (MIM 613540) and SSSPTB (MIM 610412), that confer acyl-CoA preference of the SPT enzyme and are essential for maximal enzyme activity (Han et al., 2009 [PubMed 19416851]).[supplied by OMIM, Nov 2010]

Orthologs

SymbolSpecies
sptl-2 Caenorhabditis elegans
lace Drosophila melanogaster
sptlc3 Danio rerio
Sptlc3 Mus musculus
Sptlc3 Rattus norvegicus
LCB2 Saccharomyces cerevisiae
lcb2 Schizosaccharomyces pombe

Links to external resources

Changes associated with this gene

GO Terms

GO IDGO TermGO Category
GO:0006665 sphingolipid metabolic process biological_process
GO:0009058 biosynthetic process biological_process
GO:0030148 sphingolipid biosynthetic process biological_process
GO:0044281 small molecule metabolic process biological_process
GO:0046520 sphingoid biosynthetic process biological_process
GO:0005783 endoplasmic reticulum cellular_component
GO:0005789 endoplasmic reticulum membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral to membrane cellular_component
GO:0017059 serine C-palmitoyltransferase complex cellular_component
GO:0003824 catalytic activity molecular_function
GO:0004758 serine C-palmitoyltransferase activity molecular_function
GO:0016746 transferase activity, transferring acyl groups molecular_function
GO:0016769 transferase activity, transferring nitrogenous groups molecular_function
GO:0030170 pyridoxal phosphate binding molecular_function